Tag: modeling

Research in Virtual Lab Worlds during the COVID-19 Pandemic

Heading into Steve’s[1] university laboratory for the first time, I anxiously waited to begin observing the lab members’ work with computational protein structure prediction and design. This lab was one of the first spaces for such work in the US. Gaining legitimacy and recognition after the rise of genomics, protein computation aims to model protein structure and its interactions with other proteins, enzymes, and surroundings. This has become crucial for biological, biochemical, and even medical research. Needless to say, I was excited to see leaders in the field hard at work, but then was shocked to walk into a plain, tan-colored office area with four separate desks, everything completely quiet. Because of their collaborative work with other research projects, I had expected to see a more vibrant and dynamic lab space. Sadly, my excitement and energy slowly dissolved away into boredom watching four students type code into their computers. As I observed lab members code and model proteins, I wanted to understand how so much excitement and a strong collaborative environment with outside sciences could come from such mundane computer work. (read more...)

Deep Thunder: The Rise of Big Meteorology

Today has been predicted 26 billion times. The same could be said for tomorrow and the foreseeable days to follow. This prodigious divination is the work of just one entity—IBM’s The Weather Company. These 26 billion daily forecasts of IBM likely represent only a small fraction of the models and projections to which any particular day is subjected (the financial and military sectors are equally ambitious prognosticators). Backed by IBM’s computational juggernaut, The Weather Company is burning through terabytes at a brow-furrowing velocity in its effort to fit the world into a forecast. (Listen Now...)